July 2006
Volume 1, Issue 7
Drug Metabolism

Sean Ekins
The View from Here
Sean Ekins

From a pharmaceutical perspective it is important to understand the metabolism of a new chemical entity as early as possible, as metabolic transformations in vivo can modify bioavailability, efficacy, chronic toxicity and rate and route of excretion...
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RNAi for target discovery and validation

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R&D Strategy

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Medicinal Chemistry
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  Top Reviews
Designing better drugs: predicting cytochrome P450 metabolism

Marcel J. de Groot
Drug Discovery Today

Many 3D ligand-based and structure-based computational approaches have been used to predict, and thus help explain, the metabolism catalyzed by the enzymes of the cytochrome P450 superfamily (P450s). P450s are responsible for >90% of the metabolism of all drugs, so the computational prediction of metabolism can help to design out drug–drug interactions in the early phases of the drug discovery process...

New perspectives on the impact of cytochrome P450 3A expression for pediatric pharmacology

Jeffrey C. Stevens
Drug Discovery Today

Advances in the basic and clinical sciences of drug actions and safety have been applied almost exclusively to the largest demographic patient group – adults. Metabolism-dependent drug clearance is not only a primary determinant for obtaining efficacious drug exposure, but could also demonstrate clear age-dependence...


Bridging cheminformatic metabolite prediction and tandem mass spectrometry

M. Reza Anari and Thomas A. Baillie
Drug Discovery Today

Despite recent technological advances, the analysis of biological samples for metabolite identification purposes often requires prior knowledge of the metabolite masses to successfully acquire high quality mass spectral data in the presence of intense background and interfering matrix signals...

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Abstracts of Key Research Articles

Comparative analysis of substrate and inhibitor interactions with CYP3A4 and CYP3A5
Soars M G, Grime K, Riley RJ
Xenobiotica, Volume 36, Number 4, April 2006, pp. 287-299(13)

Crystal structure of human cytochrome P450 2D6
Rowland P et al.
J Biol Chem. 2006 Mar 17;281(11):7614-22

Predicting in vivo drug interactions from in vitro drug discovery data
Wienkers LC, Heath TG
Nat Rev Drug Discov. 2005 Oct;4(10):825-33

Identification of a novel in vitro metabonate from liver microsomal incubations
Chun Li et al.
Drug Metab Dispos 2006 34: 901-905

The human intestinal cytochrome P450 “pie”
Mary F. Paine et al.
Drug Metab Dispos 2006 34: 880-886

In silico and in vitro screening for inhibition of cytochrome P450 CYP3A by comedications commonly used by patients with cancer
Jean-Didier Marechal et al.
Drug Metab Dispos 2006 34: 534-538

Transient inhibition of CYP3A in rats by star fruit juice
Muneaki Hidaka et al.
Drug Metab Dispos 2006 34: 343-345

A combined approach to drug metabolism and toxicity assessment
Sean Ekins et al.
Drug Metab Dispos 2006 34: 495-503

MetaSite: understanding metabolism in human cytochromes from the perspective of the chemist
Cruciani G et al.
J Med Chem. 2005 Nov 3;48(22):6970-9

Evaluation of 170 Xenobiotics as Transactivators of Human Pregnane X Receptor (hPXR) and Correlation to Known CYP3A4 Drug Interactions
Sinz M et al.
Curr Drug Metab. 2006 May;7(4):375-88

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